Module Handbook

  • Dynamischer Default-Fachbereich geändert auf BIO

Course BIO-ECO-04-K-7

Molecular Ecology (L, 12.0 LP)

Course Type

SWS Type Course Form CP (Effort) Presence-Time / Self-Study
- L Laboratory course 12.0 CP 160 h 200 h
(L) 12.0 CP 160 h 200 h

Basedata

SWS L
CP, Effort 12.0 CP = 360 h
Position of the semester 1 Sem. in WiSe
Level [7] Master (Advanced)
Language [EN] English
Lecturers
Area of study [BIO-ECO] Ecology
Livecycle-State [NORM] Active

Contents

Characterization of microbial communities and relation of these communities to their natural habitats. Focus will be on unicellular eukaryotes. Samples will be taken by students during a field trip (such as the Wadden Sea, Sylt). In the field, a detailed habitat characterization will be conducted for sampling sites. Samples (such as water or sediment) will be prepared in the field for detailed analyses in the lab. Among others, nucleic acids of microbial communities will be extracted from environmental samples, followed by targeted PCR of taxonomic marker gene regions, quantitative RT-PCR of cDNA to quantify specific functional microbial processes, high-throughput sequencing, computational massive sequence data processing and community statistical analyses (using for example the program package R). These data will then be placed in context to environmental habitat characteristics to explain organism-environment relationships and the occurrences of specific microbes in specific habitats. Further techniques will include for example flow-cytometry, epifluorescence microscopy, single-cell PCR and phylogeny.

Requirements for attendance (informal)

None

Requirements for attendance (formal)

Passed examination of [BIO-ECO-01-K-5] "Molecular Ecology" and [BIO-ECO-07-K-4] "Molecular Ecology"

References to Course [BIO-ECO-04-K-7]

Course-Pool Name
[BIO-VM_Eco-KPOOL-7] Advanced Practical Eco